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The PoPS papers  

Contact information for the PoPS project  

About the PoPS project: who we are  

If you use PoPS in your work, please cite one of the two following papers:

The extended version of the original PoPS paper:
S.E. Boyd, M. Garcia de la Banda, R.N. Pike, J.C. Whisstock, G.B. Rudy,
PoPS: A Computational Tool for Modeling and Predicting Protease Specificity,
J Bioinform Comput Biol. 2005 Jun; vol 3 (3)   [Paper pdf]

The original PoPS paper:
S.E. Boyd, M. Garcia de la Banda, R.N. Pike, J.C. Whisstock, G.B. Rudy,
PoPS: A Computational Tool for Modeling and Predicting Protease Specificity,
Proceedings of the IEEE Computer Society Bioinformatics Conference, pp 372-381, Stanford, CA, August 2004.   [Paper pdf]

Other work that has used PoPS:

Golubkov VS, Boyd S, Savinov AY, Chekanov AV, Osterman AL, Remacle A, Rozanov DV, Doxsey SJ, Strongin AY
Membrane Type-1 Matrix Metalloproteinase (MT1-MMP) Exhibits an Important Intracellular Cleavage Function and Causes Chromosome Instability,
J Biol Chem. 2005 Jul 1; vol 280 (26): pp 25079-86.   [PubMed]

PoPS is written and maintained by Sarah Boyd and Torsten Seemann from the Victorian Bioinformatics Consortium, Melbourne, Australia. Questions about PoPS and the related research should be directed to Sarah, who can be contacted in the following ways:

Email:   Sarah.Boyd@Infotech.monash.edu.au

Snail Mail:
Sarah Boyd
The Victorian Bioinformatics Consortium
Building 75
Monash University
Melbourne
Victoria 3800
Australia

Telephone:    +61 3 9905 8106

Facsimile:    +61 3 9905 8241

The PoPS project is based at Monash University, Melbourne, Australia, and is a collaborative effort between the laboratories of the following researchers:

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